Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC026120.1-201ENST00000611536 926 ntBASIC14.01□□□□□ -0.17
HLA-DPB1P04440 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DPB1P04440 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 AC018892.3-201ENST00000623986 2499 ntBASIC14□□□□□ -0.17
HLA-DPB1P04440 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HLA-DPB1P04440 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14□□□□□ -0.17
HLA-DPB1P04440 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 COA5-202ENST00000409997 557 ntTSL 4 BASIC14□□□□□ -0.17
HLA-DPB1P04440 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 AC079140.1-201ENST00000508039 487 ntBASIC14□□□□□ -0.17
HLA-DPB1P04440 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DPB1P04440 AC243562.1-201ENST00000560672 389 ntBASIC14□□□□□ -0.17
HLA-DPB1P04440 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DPB1P04440 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14□□□□□ -0.17
HLA-DPB1P04440 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DPB1P04440 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DPB1P04440 ZBTB45P2-201ENST00000452245 1531 ntBASIC14□□□□□ -0.17
HLA-DPB1P04440 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DPB1P04440 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DPB1P04440 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 KRT18P13-201ENST00000400056 1290 ntBASIC13.99□□□□□ -0.17
HLA-DPB1P04440 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 RN7SL589P-201ENST00000481268 310 ntBASIC13.99□□□□□ -0.17
HLA-DPB1P04440 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DPB1P04440 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms