Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
APOBP04114 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 AL645728.2-202ENST00000641679 227 ntBASIC9.34□□□□□ -0.91
APOBP04114 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 PHBP15-201ENST00000574228 665 ntBASIC9.34□□□□□ -0.91
APOBP04114 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 ILF3-AS1-201ENST00000591501 1983 ntBASIC9.34□□□□□ -0.91
APOBP04114 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 AC025183.3-201ENST00000623526 1482 ntBASIC9.34□□□□□ -0.91
APOBP04114 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
APOBP04114 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
APOBP04114 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 AP001184.1-201ENST00000637936 376 ntBASIC9.34□□□□□ -0.91
APOBP04114 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 CICP11-201ENST00000434745 2827 ntBASIC9.33□□□□□ -0.92
APOBP04114 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 AC004066.1-201ENST00000502488 802 ntBASIC9.33□□□□□ -0.92
APOBP04114 CCNC-217ENST00000523985 958 ntTSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
APOBP04114 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC9.33□□□□□ -0.92
APOBP04114 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
APOBP04114 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC9.33□□□□□ -0.92
APOBP04114 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 GOLGA2P7-209ENST00000560408 745 ntBASIC9.33□□□□□ -0.92
APOBP04114 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC9.33□□□□□ -0.92
APOBP04114 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
APOBP04114 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 AC018695.6-201ENST00000614011 534 ntBASIC9.33□□□□□ -0.92
APOBP04114 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 PES1-204ENST00000402284 2144 ntTSL 5 BASIC9.33□□□□□ -0.92
APOBP04114 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC9.33□□□□□ -0.92
APOBP04114 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
APOBP04114 AC079328.2-201ENST00000561241 3354 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms