Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 SPDYE18-201ENST00000510091 1050 ntBASIC12.24□□□□□ -0.45
TRGV3P03979 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.24□□□□□ -0.45
TRGV3P03979 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 TPRX2P-201ENST00000535362 881 ntBASIC12.24□□□□□ -0.45
TRGV3P03979 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV3P03979 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
TRGV3P03979 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 AC092337.1-201ENST00000568699 1129 ntBASIC12.24□□□□□ -0.45
TRGV3P03979 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 MIR4745-201ENST00000577608 62 ntBASIC12.24□□□□□ -0.45
TRGV3P03979 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV3P03979 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.24□□□□□ -0.45
TRGV3P03979 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.24□□□□□ -0.45
TRGV3P03979 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV3P03979 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV3P03979 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 AC105250.1-201ENST00000509378 2057 ntBASIC12.23□□□□□ -0.45
TRGV3P03979 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV3P03979 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRGV3P03979 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRGV3P03979 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 AC138969.3-201ENST00000546612 1459 ntBASIC12.23□□□□□ -0.45
TRGV3P03979 AC138932.2-201ENST00000548268 1459 ntBASIC12.23□□□□□ -0.45
TRGV3P03979 AC126755.4-201ENST00000549796 1459 ntBASIC12.23□□□□□ -0.45
TRGV3P03979 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.23□□□□□ -0.45
TRGV3P03979 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 FAM207CP-201ENST00000443486 507 ntBASIC12.23□□□□□ -0.45
TRGV3P03979 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 AC092364.2-202ENST00000597012 1073 ntBASIC12.23□□□□□ -0.45
TRGV3P03979 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 AC020658.6-201ENST00000623564 1870 ntBASIC12.23□□□□□ -0.45
TRGV3P03979 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
TRGV3P03979 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV3P03979 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.22□□□□□ -0.45
TRGV3P03979 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.22□□□□□ -0.45
TRGV3P03979 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 AC067750.1-201ENST00000608826 6545 ntBASIC12.22□□□□□ -0.45
TRGV3P03979 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
TRGV3P03979 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRGV3P03979 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRGV3P03979 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms