Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.33■□□□□ 0.53
COL1A1P02452 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL1A1P02452 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL1A1P02452 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL1A1P02452 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.33■□□□□ 0.53
COL1A1P02452 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL1A1P02452 RN7SKP175-201ENST00000408472 289 ntBASIC18.33■□□□□ 0.53
COL1A1P02452 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
COL1A1P02452 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.33■□□□□ 0.53
COL1A1P02452 MIR4683-201ENST00000579659 81 ntBASIC18.33■□□□□ 0.53
COL1A1P02452 AC138649.2-201ENST00000615886 705 ntBASIC18.33■□□□□ 0.53
COL1A1P02452 AC091812.3-201ENST00000621362 345 ntBASIC18.33■□□□□ 0.53
COL1A1P02452 HTR7P1-202ENST00000624664 4411 ntBASIC18.33■□□□□ 0.53
COL1A1P02452 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL1A1P02452 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL1A1P02452 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL1A1P02452 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.33■□□□□ 0.53
COL1A1P02452 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.33■□□□□ 0.53
COL1A1P02452 SSR4P1-203ENST00000599569 2260 ntBASIC18.33■□□□□ 0.53
COL1A1P02452 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.33■□□□□ 0.53
COL1A1P02452 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.33■□□□□ 0.52
COL1A1P02452 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.33■□□□□ 0.52
COL1A1P02452 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.33■□□□□ 0.52
COL1A1P02452 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
COL1A1P02452 KRT8P4-201ENST00000509735 1454 ntBASIC18.33■□□□□ 0.52
COL1A1P02452 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.33■□□□□ 0.52
COL1A1P02452 AC087481.3-201ENST00000602886 1894 ntBASIC18.33■□□□□ 0.52
COL1A1P02452 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
COL1A1P02452 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COL1A1P02452 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL1A1P02452 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.33■□□□□ 0.52
COL1A1P02452 CHMP4BP1-201ENST00000556017 588 ntBASIC18.33■□□□□ 0.52
COL1A1P02452 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.33■□□□□ 0.52
COL1A1P02452 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 AC016629.1-201ENST00000596579 586 ntBASIC18.33■□□□□ 0.52
COL1A1P02452 ZACNP1-201ENST00000612259 710 ntBASIC18.33■□□□□ 0.52
COL1A1P02452 AP001002.3-201ENST00000623482 206 ntBASIC18.33■□□□□ 0.52
COL1A1P02452 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL1A1P02452 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.32■□□□□ 0.52
COL1A1P02452 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.32■□□□□ 0.52
COL1A1P02452 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.32■□□□□ 0.52
COL1A1P02452 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL1A1P02452 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 AC011840.2-201ENST00000563063 1520 ntBASIC18.32■□□□□ 0.52
COL1A1P02452 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.32■□□□□ 0.52
COL1A1P02452 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.32■□□□□ 0.52
COL1A1P02452 FNTAP2-201ENST00000430308 634 ntBASIC18.32■□□□□ 0.52
COL1A1P02452 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.32■□□□□ 0.52
COL1A1P02452 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.32■□□□□ 0.52
COL1A1P02452 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.32■□□□□ 0.52
COL1A1P02452 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL1A1P02452 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.32■□□□□ 0.52
COL1A1P02452 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.32■□□□□ 0.52
COL1A1P02452 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL1A1P02452 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.31■□□□□ 0.52
COL1A1P02452 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 REXO1L2P-201ENST00000425429 2069 ntBASIC18.31■□□□□ 0.52
COL1A1P02452 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.31■□□□□ 0.52
COL1A1P02452 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.31■□□□□ 0.52
COL1A1P02452 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 RN7SKP230-201ENST00000365642 335 ntBASIC18.31■□□□□ 0.52
COL1A1P02452 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.31■□□□□ 0.52
COL1A1P02452 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.31■□□□□ 0.52
COL1A1P02452 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.31■□□□□ 0.52
COL1A1P02452 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.31■□□□□ 0.52
COL1A1P02452 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.31■□□□□ 0.52
COL1A1P02452 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
COL1A1P02452 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.31■□□□□ 0.52
COL1A1P02452 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms