Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 AP002803.1-201ENST00000528836 498 ntBASIC16.45■□□□□ 0.22
TIMP1P01033 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.45■□□□□ 0.22
TIMP1P01033 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 AL031713.1-201ENST00000564813 661 ntBASIC16.45■□□□□ 0.22
TIMP1P01033 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 FAM90A7P-201ENST00000382628 1395 ntBASIC16.45■□□□□ 0.22
TIMP1P01033 FAM90A23P-201ENST00000400136 1395 ntBASIC16.45■□□□□ 0.22
TIMP1P01033 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TIMP1P01033 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TIMP1P01033 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.45■□□□□ 0.22
TIMP1P01033 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.44■□□□□ 0.22
TIMP1P01033 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TIMP1P01033 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 INE2-201ENST00000630399 1874 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 AC020916.1-201ENST00000587762 1774 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 FAM90A2P-201ENST00000511144 1395 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 FAM90A25P-201ENST00000528404 1395 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 AC012313.1-201ENST00000593393 3059 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.44■□□□□ 0.22
TIMP1P01033 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.44■□□□□ 0.22
TIMP1P01033 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 AC026803.1-201ENST00000569130 274 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.44■□□□□ 0.22
TIMP1P01033 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TIMP1P01033 AC242376.2-201ENST00000619355 883 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 AC007718.1-201ENST00000621078 280 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TIMP1P01033 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TIMP1P01033 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 AC009093.2-202ENST00000620513 2079 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TIMP1P01033 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 AL008718.2-201ENST00000609206 1313 ntBASIC16.44■□□□□ 0.22
TIMP1P01033 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TIMP1P01033 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 MBLAC2-202ENST00000514906 1936 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 AC005332.8-201ENST00000622750 2735 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
TIMP1P01033 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TIMP1P01033 OR2K2-202ENST00000374428 1038 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TIMP1P01033 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.43■□□□□ 0.22
TIMP1P01033 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.43■□□□□ 0.22
TIMP1P01033 KLF2P1-201ENST00000447438 1042 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 RN7SL67P-201ENST00000492147 296 ntBASIC16.43■□□□□ 0.22
TIMP1P01033 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.43■□□□□ 0.22
TIMP1P01033 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.43■□□□□ 0.22
TIMP1P01033 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms