Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLSTN1O94985 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLSTN1O94985 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLSTN1O94985 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLSTN1O94985 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.27■□□□□ 0.35
CLSTN1O94985 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC17.27■□□□□ 0.35
CLSTN1O94985 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLSTN1O94985 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLSTN1O94985 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.27■□□□□ 0.35
CLSTN1O94985 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 AL031595.1-201ENST00000623969 4709 ntBASIC17.26■□□□□ 0.35
CLSTN1O94985 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CLSTN1O94985 AC004987.2-201ENST00000395959 1148 ntBASIC17.26■□□□□ 0.35
CLSTN1O94985 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 AL512638.1-201ENST00000457493 794 ntBASIC17.26■□□□□ 0.35
CLSTN1O94985 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.26■□□□□ 0.35
CLSTN1O94985 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.26■□□□□ 0.35
CLSTN1O94985 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 AC018892.3-201ENST00000623986 2499 ntBASIC17.26■□□□□ 0.35
CLSTN1O94985 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CLSTN1O94985 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.26■□□□□ 0.35
CLSTN1O94985 AL359183.1-201ENST00000623796 2132 ntBASIC17.26■□□□□ 0.35
CLSTN1O94985 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLSTN1O94985 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLSTN1O94985 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.25■□□□□ 0.35
CLSTN1O94985 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.25■□□□□ 0.35
CLSTN1O94985 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.25■□□□□ 0.35
CLSTN1O94985 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.25■□□□□ 0.35
CLSTN1O94985 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLSTN1O94985 RFPL4AP1-201ENST00000530883 850 ntBASIC17.25■□□□□ 0.35
CLSTN1O94985 BANF1P1-201ENST00000553684 263 ntBASIC17.25■□□□□ 0.35
CLSTN1O94985 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.25■□□□□ 0.35
CLSTN1O94985 AC027796.2-201ENST00000575326 344 ntBASIC17.25■□□□□ 0.35
CLSTN1O94985 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLSTN1O94985 FP325330.2-201ENST00000624219 5630 ntBASIC17.25■□□□□ 0.35
CLSTN1O94985 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.25■□□□□ 0.35
CLSTN1O94985 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLSTN1O94985 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLSTN1O94985 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLSTN1O94985 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLSTN1O94985 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.25■□□□□ 0.35
CLSTN1O94985 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLSTN1O94985 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC17.24■□□□□ 0.35
CLSTN1O94985 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.24■□□□□ 0.35
CLSTN1O94985 REXO1L1P-202ENST00000608646 1974 ntBASIC17.24■□□□□ 0.35
CLSTN1O94985 AC145098.2-201ENST00000623593 3026 ntBASIC17.24■□□□□ 0.35
CLSTN1O94985 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 KRT8P37-201ENST00000451609 1420 ntBASIC17.24■□□□□ 0.35
CLSTN1O94985 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.24■□□□□ 0.35
CLSTN1O94985 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.24■□□□□ 0.35
CLSTN1O94985 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.24■□□□□ 0.35
CLSTN1O94985 SERBP1P3-201ENST00000459980 809 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms