Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.72□□□□□ -0.21
KDM4BO94953 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KDM4BO94953 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KDM4BO94953 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.72□□□□□ -0.21
KDM4BO94953 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KDM4BO94953 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KDM4BO94953 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KDM4BO94953 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KDM4BO94953 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
KDM4BO94953 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.72□□□□□ -0.21
KDM4BO94953 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KDM4BO94953 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.71□□□□□ -0.21
KDM4BO94953 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
KDM4BO94953 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 MED15P5-201ENST00000423150 992 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.71□□□□□ -0.21
KDM4BO94953 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 KRT18P3-201ENST00000451602 1288 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 AC098859.1-201ENST00000502915 1238 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 SLC25A1P1-201ENST00000528351 927 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
KDM4BO94953 AC106730.1-201ENST00000566722 1090 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KDM4BO94953 AC140113.2-201ENST00000604370 208 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.71□□□□□ -0.21
KDM4BO94953 FAM197Y3-203ENST00000618346 717 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 AC092865.6-201ENST00000642101 219 ntBASIC13.71□□□□□ -0.21
KDM4BO94953 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.71□□□□□ -0.21
KDM4BO94953 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.71□□□□□ -0.21
KDM4BO94953 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
KDM4BO94953 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
KDM4BO94953 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
KDM4BO94953 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
KDM4BO94953 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
KDM4BO94953 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.71□□□□□ -0.22
KDM4BO94953 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
KDM4BO94953 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KDM4BO94953 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
KDM4BO94953 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
KDM4BO94953 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 AC005252.3-201ENST00000623855 2258 ntBASIC13.7□□□□□ -0.22
KDM4BO94953 AKAP8P1-201ENST00000434743 1349 ntBASIC13.7□□□□□ -0.22
KDM4BO94953 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 AC232323.1-201ENST00000540724 2099 ntBASIC13.7□□□□□ -0.22
KDM4BO94953 REXO1L5P-201ENST00000622260 2098 ntBASIC13.7□□□□□ -0.22
KDM4BO94953 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
KDM4BO94953 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.7□□□□□ -0.22
KDM4BO94953 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KDM4BO94953 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms