Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.51□□□□□ -0.25
UPK1BO75841 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.51□□□□□ -0.25
UPK1BO75841 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 AL158047.1-201ENST00000445918 881 ntBASIC13.51□□□□□ -0.25
UPK1BO75841 AC091607.1-201ENST00000490318 1060 ntBASIC13.51□□□□□ -0.25
UPK1BO75841 MIR4785-201ENST00000585005 73 ntBASIC13.51□□□□□ -0.25
UPK1BO75841 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.51□□□□□ -0.25
UPK1BO75841 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
UPK1BO75841 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UPK1BO75841 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.51□□□□□ -0.25
UPK1BO75841 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
UPK1BO75841 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UPK1BO75841 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UPK1BO75841 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK1BO75841 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK1BO75841 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK1BO75841 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 PRYP5-201ENST00000451909 266 ntBASIC13.5□□□□□ -0.25
UPK1BO75841 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.5□□□□□ -0.25
UPK1BO75841 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.5□□□□□ -0.25
UPK1BO75841 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
UPK1BO75841 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UPK1BO75841 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
UPK1BO75841 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK1BO75841 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UPK1BO75841 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UPK1BO75841 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.5□□□□□ -0.25
UPK1BO75841 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 INE2-201ENST00000630399 1874 ntBASIC13.49□□□□□ -0.25
UPK1BO75841 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms