Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1FO60840 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.11■□□□□ 0.65
CACNA1FO60840 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1FO60840 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 KHSRPP1-201ENST00000427983 1768 ntBASIC19.11■□□□□ 0.65
CACNA1FO60840 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CACNA1FO60840 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 FAM86MP-201ENST00000340703 885 ntBASIC19.11■□□□□ 0.65
CACNA1FO60840 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 HIST2H2BB-201ENST00000449108 381 ntBASIC19.11■□□□□ 0.65
CACNA1FO60840 AC100850.1-201ENST00000506768 649 ntBASIC19.11■□□□□ 0.65
CACNA1FO60840 GCOM2-201ENST00000509133 1104 ntBASIC19.11■□□□□ 0.65
CACNA1FO60840 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1FO60840 AC002472.3-201ENST00000640124 621 ntBASIC19.11■□□□□ 0.65
CACNA1FO60840 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CACNA1FO60840 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.11■□□□□ 0.65
CACNA1FO60840 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.11■□□□□ 0.65
CACNA1FO60840 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 TPM3P8-201ENST00000330554 643 ntBASIC19.1■□□□□ 0.65
CACNA1FO60840 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CACNA1FO60840 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 AC027237.1-201ENST00000560942 655 ntBASIC19.1■□□□□ 0.65
CACNA1FO60840 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 MIR4683-201ENST00000579659 81 ntBASIC19.1■□□□□ 0.65
CACNA1FO60840 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.1■□□□□ 0.65
CACNA1FO60840 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CACNA1FO60840 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
CACNA1FO60840 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA1FO60840 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CACNA1FO60840 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CACNA1FO60840 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.1■□□□□ 0.65
CACNA1FO60840 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.1■□□□□ 0.65
CACNA1FO60840 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CACNA1FO60840 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 AL583810.1-201ENST00000553344 1045 ntBASIC19.1■□□□□ 0.65
CACNA1FO60840 AC103988.2-201ENST00000561804 725 ntBASIC19.1■□□□□ 0.65
CACNA1FO60840 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.1■□□□□ 0.65
CACNA1FO60840 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.1■□□□□ 0.65
CACNA1FO60840 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.09■□□□□ 0.65
CACNA1FO60840 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
CACNA1FO60840 AL023775.1-201ENST00000454907 1746 ntBASIC19.09■□□□□ 0.65
CACNA1FO60840 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CACNA1FO60840 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CACNA1FO60840 AC010141.1-201ENST00000411585 623 ntBASIC19.09■□□□□ 0.65
CACNA1FO60840 HLA-V-201ENST00000429037 534 ntBASIC19.09■□□□□ 0.65
CACNA1FO60840 AP006547.1-201ENST00000563435 692 ntBASIC19.09■□□□□ 0.65
CACNA1FO60840 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.09■□□□□ 0.65
CACNA1FO60840 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CACNA1FO60840 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CACNA1FO60840 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CACNA1FO60840 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CACNA1FO60840 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms