Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
MSH5O43196 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
MSH5O43196 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
MSH5O43196 GNAS-209ENST00000371081 730 ntTSL 2 BASIC21.84■■□□□ 1.09
MSH5O43196 MYCLP1-201ENST00000372451 1075 ntBASIC21.84■■□□□ 1.09
MSH5O43196 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.84■■□□□ 1.09
MSH5O43196 TXNL1P1-201ENST00000429528 554 ntBASIC21.84■■□□□ 1.09
MSH5O43196 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC21.84■■□□□ 1.09
MSH5O43196 LINC02515-201ENST00000503677 536 ntTSL 3 BASIC21.84■■□□□ 1.09
MSH5O43196 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC21.84■■□□□ 1.09
MSH5O43196 AC124947.2-201ENST00000547118 1133 ntBASIC21.84■■□□□ 1.09
MSH5O43196 C2orf69P2-201ENST00000562032 1123 ntBASIC21.84■■□□□ 1.09
MSH5O43196 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.84■■□□□ 1.09
MSH5O43196 AL513477.2-201ENST00000607858 568 ntBASIC21.84■■□□□ 1.09
MSH5O43196 TUG1_1.1-201ENST00000610654 145 ntBASIC21.84■■□□□ 1.09
MSH5O43196 AC005785.2-201ENST00000624655 631 ntBASIC21.84■■□□□ 1.09
MSH5O43196 AL645728.2-201ENST00000641974 660 ntBASIC21.84■■□□□ 1.09
MSH5O43196 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC21.84■■□□□ 1.09
MSH5O43196 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.84■■□□□ 1.09
MSH5O43196 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSH5O43196 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.84■■□□□ 1.09
MSH5O43196 AC090340.1-201ENST00000620778 4980 ntBASIC21.84■■□□□ 1.09
MSH5O43196 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSH5O43196 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.83■■□□□ 1.09
MSH5O43196 AKAP8P1-201ENST00000434743 1349 ntBASIC21.83■■□□□ 1.09
MSH5O43196 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
MSH5O43196 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSH5O43196 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.83■■□□□ 1.09
MSH5O43196 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
MSH5O43196 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.83■■□□□ 1.09
MSH5O43196 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSH5O43196 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSH5O43196 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSH5O43196 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.83■■□□□ 1.09
MSH5O43196 ATP5G2P4-201ENST00000442175 420 ntBASIC21.83■■□□□ 1.09
MSH5O43196 AC087163.2-201ENST00000457299 853 ntBASIC21.83■■□□□ 1.09
MSH5O43196 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSH5O43196 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.83■■□□□ 1.09
MSH5O43196 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
MSH5O43196 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.83■■□□□ 1.09
MSH5O43196 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.83■■□□□ 1.09
MSH5O43196 AC124283.3-201ENST00000570869 594 ntBASIC21.83■■□□□ 1.09
MSH5O43196 AP000322.2-201ENST00000608289 510 ntBASIC21.83■■□□□ 1.09
MSH5O43196 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
MSH5O43196 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.83■■□□□ 1.09
MSH5O43196 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
MSH5O43196 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSH5O43196 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSH5O43196 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSH5O43196 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSH5O43196 AC099063.4-201ENST00000641099 1602 ntBASIC21.83■■□□□ 1.08
MSH5O43196 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
MSH5O43196 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.83■■□□□ 1.08
MSH5O43196 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSH5O43196 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSH5O43196 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.82■■□□□ 1.08
MSH5O43196 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC21.82■■□□□ 1.08
MSH5O43196 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.82■■□□□ 1.08
MSH5O43196 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC21.82■■□□□ 1.08
MSH5O43196 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.82■■□□□ 1.08
MSH5O43196 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
MSH5O43196 AC226101.1-201ENST00000401483 387 ntBASIC21.82■■□□□ 1.08
MSH5O43196 P2RY10P2-201ENST00000416730 913 ntBASIC21.82■■□□□ 1.08
MSH5O43196 SPDYE14P-201ENST00000442619 822 ntBASIC21.82■■□□□ 1.08
MSH5O43196 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.82■■□□□ 1.08
MSH5O43196 OR6C72P-201ENST00000451403 892 ntBASIC21.82■■□□□ 1.08
MSH5O43196 KRT17P7-201ENST00000451704 1104 ntBASIC21.82■■□□□ 1.08
MSH5O43196 CYCSP53-201ENST00000455540 265 ntBASIC21.82■■□□□ 1.08
MSH5O43196 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.82■■□□□ 1.08
MSH5O43196 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSH5O43196 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC21.82■■□□□ 1.08
MSH5O43196 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC21.82■■□□□ 1.08
MSH5O43196 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC21.82■■□□□ 1.08
MSH5O43196 AC009812.1-201ENST00000605948 1059 ntBASIC21.82■■□□□ 1.08
MSH5O43196 AP001350.2-201ENST00000625104 1094 ntBASIC21.82■■□□□ 1.08
MSH5O43196 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms