Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 KRT18P43-201ENST00000469825 1281 ntBASIC15.22■□□□□ 0.03
CDC7O00311 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.22■□□□□ 0.03
CDC7O00311 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.22■□□□□ 0.03
CDC7O00311 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.22■□□□□ 0.03
CDC7O00311 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDC7O00311 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 AP000845.1-201ENST00000581677 2131 ntBASIC15.22■□□□□ 0.03
CDC7O00311 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
CDC7O00311 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC7O00311 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC7O00311 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDC7O00311 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 AC138969.3-201ENST00000546612 1459 ntBASIC15.21■□□□□ 0.03
CDC7O00311 AC138932.2-201ENST00000548268 1459 ntBASIC15.21■□□□□ 0.03
CDC7O00311 AC126755.4-201ENST00000549796 1459 ntBASIC15.21■□□□□ 0.03
CDC7O00311 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
CDC7O00311 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.21■□□□□ 0.03
CDC7O00311 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDC7O00311 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 GHSR-202ENST00000427970 912 ntBASIC15.21■□□□□ 0.03
CDC7O00311 AC241585.1-201ENST00000433527 519 ntBASIC15.21■□□□□ 0.03
CDC7O00311 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDC7O00311 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.21■□□□□ 0.03
CDC7O00311 ZNF890P-202ENST00000530367 1156 ntBASIC15.21■□□□□ 0.03
CDC7O00311 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.21■□□□□ 0.03
CDC7O00311 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 AL390754.1-201ENST00000619088 582 ntBASIC15.21■□□□□ 0.03
CDC7O00311 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDC7O00311 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDC7O00311 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDC7O00311 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CDC7O00311 WASH3P-207ENST00000560956 1394 ntBASIC15.21■□□□□ 0.02
CDC7O00311 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDC7O00311 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CDC7O00311 AL359258.3-201ENST00000622910 2331 ntBASIC15.21■□□□□ 0.02
CDC7O00311 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC7O00311 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC7O00311 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDC7O00311 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC7O00311 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDC7O00311 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.21■□□□□ 0.02
CDC7O00311 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.21■□□□□ 0.02
CDC7O00311 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms