Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.44□□□□□ -0.58
NACAE9PAV3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.44□□□□□ -0.58
NACAE9PAV3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NACAE9PAV3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 BNIP3P1-202ENST00000550043 1585 ntBASIC11.43□□□□□ -0.58
NACAE9PAV3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.43□□□□□ -0.58
NACAE9PAV3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.43□□□□□ -0.58
NACAE9PAV3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.43□□□□□ -0.58
NACAE9PAV3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.43□□□□□ -0.58
NACAE9PAV3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.43□□□□□ -0.58
NACAE9PAV3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.43□□□□□ -0.58
NACAE9PAV3 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.43□□□□□ -0.58
NACAE9PAV3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.43□□□□□ -0.58
NACAE9PAV3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.43□□□□□ -0.58
NACAE9PAV3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NACAE9PAV3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NACAE9PAV3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NACAE9PAV3 AC139749.1-202ENST00000617529 3139 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 AC018892.3-201ENST00000623986 2499 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.42□□□□□ -0.58
NACAE9PAV3 AL671277.1-201ENST00000429656 993 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 AC005237.2-201ENST00000434368 219 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.42□□□□□ -0.58
NACAE9PAV3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
NACAE9PAV3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.42□□□□□ -0.58
NACAE9PAV3 AL390955.2-201ENST00000603032 514 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 AC084121.4-201ENST00000641598 221 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 AF228730.8-201ENST00000642140 221 ntBASIC11.42□□□□□ -0.58
NACAE9PAV3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.42□□□□□ -0.58
NACAE9PAV3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NACAE9PAV3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms