Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 NUS1P3-201ENST00000423502 862 ntBASIC13.68□□□□□ -0.22
NPIPB4C9JG80 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 TPRX2P-201ENST00000535362 881 ntBASIC13.68□□□□□ -0.22
NPIPB4C9JG80 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 AC005498.2-205ENST00000593218 784 ntBASIC13.68□□□□□ -0.22
NPIPB4C9JG80 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 AC093813.1-201ENST00000605066 256 ntBASIC13.68□□□□□ -0.22
NPIPB4C9JG80 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 AC106028.4-201ENST00000614509 607 ntBASIC13.68□□□□□ -0.22
NPIPB4C9JG80 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 LILRP1-201ENST00000444199 1370 ntBASIC13.68□□□□□ -0.22
NPIPB4C9JG80 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 PMS2P2-201ENST00000425039 1128 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC093214.1-201ENST00000511688 1107 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC055876.2-201ENST00000531834 546 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 BRI3BPP1-201ENST00000594224 787 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AC107373.2-201ENST00000607735 490 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AL662799.1-202ENST00000614205 422 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 TSPY26P-202ENST00000565928 3884 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 CICP24-201ENST00000605464 2705 ntBASIC13.67□□□□□ -0.22
NPIPB4C9JG80 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPB4C9JG80 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPB4C9JG80 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms