Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 KRTAP10-13P-201ENST00000412914 571 ntBASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 AL137783.1-201ENST00000623494 1896 ntBASIC21.95■■□□□ 1.1
CCDC144AA2RUR9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 AP000593.2-201ENST00000542775 1433 ntBASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 KRT8P4-201ENST00000509735 1454 ntBASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 POM121L10P-201ENST00000436994 1285 ntBASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 AC244157.2-201ENST00000616239 1006 ntBASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 AC112693.3-201ENST00000624819 1983 ntBASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC144AA2RUR9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 RN7SKP175-201ENST00000408472 289 ntBASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 AP001258.2-201ENST00000529891 490 ntBASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 AP001002.3-201ENST00000623482 206 ntBASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC144AA2RUR9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 AC087481.3-201ENST00000602886 1894 ntBASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC144AA2RUR9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms