Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC22.53■■□□□ 1.2
HFM1A2PYH4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC22.53■■□□□ 1.2
HFM1A2PYH4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC22.53■■□□□ 1.2
HFM1A2PYH4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC22.53■■□□□ 1.2
HFM1A2PYH4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC22.53■■□□□ 1.2
HFM1A2PYH4 AC010328.2-201ENST00000597698 1111 ntBASIC22.53■■□□□ 1.2
HFM1A2PYH4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC22.53■■□□□ 1.2
HFM1A2PYH4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.53■■□□□ 1.2
HFM1A2PYH4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HFM1A2PYH4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 COX5BP1-201ENST00000507622 393 ntBASIC22.52■■□□□ 1.2
HFM1A2PYH4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 AC104640.1-201ENST00000562617 2109 ntBASIC22.52■■□□□ 1.2
HFM1A2PYH4 RN7SL560P-201ENST00000577943 264 ntBASIC22.52■■□□□ 1.2
HFM1A2PYH4 ZACNP1-201ENST00000612259 710 ntBASIC22.52■■□□□ 1.2
HFM1A2PYH4 AC005695.3-201ENST00000614522 232 ntBASIC22.52■■□□□ 1.2
HFM1A2PYH4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HFM1A2PYH4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HFM1A2PYH4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 AC003102.2-201ENST00000589195 1469 ntBASIC22.51■■□□□ 1.19
HFM1A2PYH4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 GOLGA2P4-201ENST00000441462 777 ntBASIC22.51■■□□□ 1.19
HFM1A2PYH4 CHMP1AP1-201ENST00000445563 662 ntBASIC22.51■■□□□ 1.19
HFM1A2PYH4 HSPB1P2-201ENST00000448722 546 ntBASIC22.51■■□□□ 1.19
HFM1A2PYH4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 ACR-203ENST00000529621 708 ntTSL 5 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 MIR4741-201ENST00000579822 90 ntBASIC22.51■■□□□ 1.19
HFM1A2PYH4 PPY2P-201ENST00000582808 702 ntBASIC22.51■■□□□ 1.19
HFM1A2PYH4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC22.51■■□□□ 1.19
HFM1A2PYH4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HFM1A2PYH4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HFM1A2PYH4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HFM1A2PYH4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 AC004945.1-201ENST00000416738 983 ntBASIC22.5■■□□□ 1.19
HFM1A2PYH4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 MIR6787-201ENST00000616675 61 ntBASIC22.5■■□□□ 1.19
HFM1A2PYH4 AC009093.2-202ENST00000620513 2079 ntBASIC22.5■■□□□ 1.19
HFM1A2PYH4 AC008741.2-201ENST00000612792 3115 ntBASIC22.5■■□□□ 1.19
HFM1A2PYH4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HFM1A2PYH4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC22.5■■□□□ 1.19
HFM1A2PYH4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms