Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL512384.1-201ENST00000406683 331 ntBASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTPDC1A2A3K4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 RARRES2P5-201ENST00000564013 466 ntBASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 CICP11-201ENST00000434745 2827 ntBASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 AGAP7P-201ENST00000582299 2062 ntBASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 AGAP14-201ENST00000624701 2060 ntBASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PTPDC1A2A3K4 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.21■□□□□ 0.5
PTPDC1A2A3K4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.21■□□□□ 0.5
PTPDC1A2A3K4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
PTPDC1A2A3K4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
PTPDC1A2A3K4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 CLK3P2-201ENST00000427566 1453 ntBASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 AC104596.2-201ENST00000512793 793 ntBASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPDC1A2A3K4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms