Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 AC004870.1-201ENST00000315132 882 ntBASIC13.51□□□□□ -0.25
SHISA3A0PJX4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 AL121894.2-201ENST00000602977 491 ntBASIC13.51□□□□□ -0.25
SHISA3A0PJX4 AL121912.1-201ENST00000603683 238 ntBASIC13.51□□□□□ -0.25
SHISA3A0PJX4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AL359881.3-201ENST00000602640 1721 ntBASIC13.5□□□□□ -0.25
SHISA3A0PJX4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 EMBP1-201ENST00000458200 901 ntBASIC13.5□□□□□ -0.25
SHISA3A0PJX4 RNA5SP415-201ENST00000517246 115 ntBASIC13.5□□□□□ -0.25
SHISA3A0PJX4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AP002472.1-201ENST00000577490 586 ntBASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AC027307.2-201ENST00000591252 911 ntBASIC13.5□□□□□ -0.25
SHISA3A0PJX4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHISA3A0PJX4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms