Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 SOCS2P1-201ENST00000417727 557 ntBASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AC134915.1-201ENST00000426461 574 ntBASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 ENPP7P5-201ENST00000541031 1031 ntBASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
TSSC4Q9Y5U2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 SBF1P1-201ENST00000444527 5631 ntBASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 MIR658-201ENST00000385210 100 ntBASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 AC007274.1-201ENST00000439805 662 ntBASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 HNRNPUP1-201ENST00000554987 333 ntBASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 BRI3BPP1-201ENST00000594224 787 ntBASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 AC008735.3-201ENST00000596646 500 ntBASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TSSC4Q9Y5U2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms