Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 REXO1L6P-201ENST00000603433 1515 ntBASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.68■□□□□ 0.1
RAI2Q9Y5P3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 AL033527.4-201ENST00000641026 673 ntBASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 AC022532.1-201ENST00000624563 1728 ntBASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAI2Q9Y5P3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 VDAC1P7-201ENST00000462417 847 ntBASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 BRI3BPP1-201ENST00000594224 787 ntBASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TMEM261P1-201ENST00000604899 340 ntBASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 FLJ16779-201ENST00000612722 7638 ntBASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAI2Q9Y5P3 AC092384.3-202ENST00000564646 2873 ntBASIC15.65■□□□□ 0.1
RAI2Q9Y5P3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAI2Q9Y5P3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms