Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 TBC1D3J-201ENST00000620719 1426 ntBASIC18.55■□□□□ 0.56
ZC3H4Q9UPT8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZC3H4Q9UPT8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 AC130709.1-201ENST00000484779 1212 ntBASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 AP002803.1-201ENST00000528836 498 ntBASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H4Q9UPT8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 RPS9P1-201ENST00000419943 583 ntBASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 EIF3FP3-201ENST00000434851 1086 ntBASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 AL139008.1-201ENST00000437894 228 ntBASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 AL160314.3-201ENST00000556041 767 ntBASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 AC242376.2-201ENST00000619355 883 ntBASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 AC060834.1-201ENST00000443027 2032 ntBASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H4Q9UPT8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZC3H4Q9UPT8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZC3H4Q9UPT8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.52■□□□□ 0.55
ZC3H4Q9UPT8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ZC3H4Q9UPT8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 GHSR-202ENST00000427970 912 ntBASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 FAM58BP-201ENST00000439056 645 ntBASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
ZC3H4Q9UPT8 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms