Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AKR1B10P2-201ENST00000577332 927 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AC093813.1-201ENST00000605066 256 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 DBET-201ENST00000630918 3363 ntBASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGC3Q9UN70 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 REXO1L2P-201ENST00000425429 2069 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AL138799.1-201ENST00000448213 1675 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AC007787.1-201ENST00000588095 1583 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AC092552.1-201ENST00000547243 906 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AC123567.1-201ENST00000548294 1261 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 MIR4745-201ENST00000577608 62 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 CHCHD2P3-201ENST00000603038 451 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 TMEM261P1-201ENST00000604899 340 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC3Q9UN70 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC098850.1-201ENST00000419919 790 ntBASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms