Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 AC022210.1-201ENST00000449856 793 ntBASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 AC138696.2-201ENST00000607376 223 ntBASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 AL138725.1-201ENST00000407347 1314 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 TLE1P1-201ENST00000422965 589 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 AC234783.1-201ENST00000441761 496 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 FO681548.1-201ENST00000455617 1132 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 AL590640.2-201ENST00000457038 527 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 AC078819.1-201ENST00000547454 765 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 AC012085.1-201ENST00000548270 765 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 AC106820.3-201ENST00000561653 397 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 AC138466.3-201ENST00000619983 221 ntBASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPC1L1Q9UHC9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 C2orf69P2-201ENST00000562032 1123 ntBASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 ECM1P1-201ENST00000604092 1279 ntBASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPC1L1Q9UHC9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 AP000593.2-201ENST00000542775 1433 ntBASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms