Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC010491.1-201ENST00000563101 2797 ntBASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HOXC10Q9NYD6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC005077.2-201ENST00000449786 690 ntBASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AL391280.1-201ENST00000506969 1062 ntBASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 DUX4L47-201ENST00000566374 394 ntBASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC073413.1-201ENST00000603927 732 ntBASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC007663.3-201ENST00000609632 465 ntBASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HOXC10Q9NYD6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 IGHJ2P-201ENST00000454480 60 ntBASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 FTLP10-202ENST00000505798 471 ntBASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 ACTG1P17-201ENST00000558391 1119 ntBASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AC106872.11-201ENST00000605838 421 ntBASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 KRT8P4-201ENST00000509735 1454 ntBASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms