Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 AL662844.4-201ENST00000606367 2838 ntBASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC52A1Q9NWF4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 FAM90A7P-201ENST00000382628 1395 ntBASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 FAM90A23P-201ENST00000400136 1395 ntBASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 AC098935.1-201ENST00000446057 611 ntBASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 AC090857.1-201ENST00000527400 390 ntBASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 PCDHA14-201ENST00000506751 2298 ntBASIC21.75■■□□□ 1.07
SLC52A1Q9NWF4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 KLF2P1-201ENST00000447438 1042 ntBASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 AC011491.1-203ENST00000637688 543 ntBASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 NKILA-202ENST00000614771 2598 ntBASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC52A1Q9NWF4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 AC073150.1-201ENST00000450406 1084 ntBASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 NOC2LP1-201ENST00000450578 752 ntBASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC52A1Q9NWF4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms