Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AL589987.1-201ENST00000453380 819 ntBASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AC105250.1-201ENST00000509378 2057 ntBASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 MIR3197-201ENST00000582241 73 ntBASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AL132655.2-201ENST00000596276 594 ntBASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AC020658.6-201ENST00000623564 1870 ntBASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AL158212.4-201ENST00000624062 1286 ntBASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
SDHAF3Q9NRP4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 RN7SL399P-201ENST00000471648 279 ntBASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 AC000095.1-201ENST00000603208 874 ntBASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.27□□□□□ -0.13
SDHAF3Q9NRP4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SDHAF3Q9NRP4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SDHAF3Q9NRP4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms