Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 DUX4L45-201ENST00000566406 1057 ntBASIC18.01■□□□□ 0.47
SH2D4AQ9H788 MIR4525-201ENST00000580000 75 ntBASIC18.01■□□□□ 0.47
SH2D4AQ9H788 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 AC138951.2-201ENST00000623455 1161 ntBASIC18.01■□□□□ 0.47
SH2D4AQ9H788 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18■□□□□ 0.47
SH2D4AQ9H788 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SH2D4AQ9H788 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18■□□□□ 0.47
SH2D4AQ9H788 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18■□□□□ 0.47
SH2D4AQ9H788 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 AL596257.1-201ENST00000641463 2694 ntBASIC18■□□□□ 0.47
SH2D4AQ9H788 AL138709.1-201ENST00000614840 1693 ntBASIC18■□□□□ 0.47
SH2D4AQ9H788 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 RNU1-114P-201ENST00000365297 166 ntBASIC18■□□□□ 0.47
SH2D4AQ9H788 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 AC026954.1-201ENST00000429771 1293 ntBASIC18■□□□□ 0.47
SH2D4AQ9H788 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18■□□□□ 0.47
SH2D4AQ9H788 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18■□□□□ 0.47
SH2D4AQ9H788 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18■□□□□ 0.47
SH2D4AQ9H788 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SH2D4AQ9H788 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18■□□□□ 0.47
SH2D4AQ9H788 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 AL645728.2-202ENST00000641679 227 ntBASIC18■□□□□ 0.47
SH2D4AQ9H788 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18■□□□□ 0.47
SH2D4AQ9H788 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SH2D4AQ9H788 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH2D4AQ9H788 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SH2D4AQ9H788 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 AC006001.1-201ENST00000325130 474 ntBASIC17.99■□□□□ 0.47
SH2D4AQ9H788 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 PRSS30P-206ENST00000641773 873 ntBASIC17.99■□□□□ 0.47
SH2D4AQ9H788 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SH2D4AQ9H788 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms