Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2OQ9C0C9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBE2OQ9C0C9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
UBE2OQ9C0C9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
UBE2OQ9C0C9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 POU5F1P6-201ENST00000466990 990 ntBASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 AC000095.1-201ENST00000603208 874 ntBASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 AC107373.2-201ENST00000607735 490 ntBASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 RN7SL736P-201ENST00000613111 269 ntBASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBE2OQ9C0C9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 AL023775.1-201ENST00000454907 1746 ntBASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 AC079178.1-201ENST00000420915 656 ntBASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 AC024681.1-201ENST00000521917 487 ntBASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 ECM1P1-201ENST00000604092 1279 ntBASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2OQ9C0C9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 AC008132.1-202ENST00000342005 1389 ntBASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2OQ9C0C9 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms