Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 Z98259.2-201ENST00000641583 609 ntBASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP4Q9C0A0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 AL138725.1-201ENST00000407347 1314 ntBASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 MBLAC2-202ENST00000514906 1936 ntBASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 AC008805.1-201ENST00000590892 364 ntBASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP4Q9C0A0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 TBC1D3J-201ENST00000620719 1426 ntBASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 AL662844.4-201ENST00000606367 2838 ntBASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 AC020910.5-201ENST00000623668 1865 ntBASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 RPSAP31-201ENST00000416648 895 ntBASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 AL355334.1-201ENST00000417713 215 ntBASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 AL805961.1-201ENST00000642026 753 ntBASIC19.11■□□□□ 0.65
CNTNAP4Q9C0A0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms