Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 AC133552.4-201ENST00000576103 676 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 AC005014.3-201ENST00000605985 190 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 AC074044.1-201ENST00000609673 707 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 AC139749.1-202ENST00000617529 3139 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 AC107918.4-201ENST00000641966 3141 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 AC005252.3-201ENST00000623855 2258 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 AC240504.1-201ENST00000395709 845 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 HAUS4P1-201ENST00000406739 1145 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 AL512361.1-201ENST00000554200 418 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 RRP7BP-205ENST00000566851 833 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 AL365203.3-201ENST00000609742 2057 ntBASIC14.01□□□□□ -0.17
USB1Q9BQ65 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.01□□□□□ -0.17
USB1Q9BQ65 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USB1Q9BQ65 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 KRT8P37-201ENST00000451609 1420 ntBASIC14□□□□□ -0.17
USB1Q9BQ65 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14□□□□□ -0.17
USB1Q9BQ65 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
USB1Q9BQ65 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
USB1Q9BQ65 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms