Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LAGE3P1-201ENST00000425356 484 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 KRT18P27-201ENST00000427733 1299 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.32□□□□□ -0.76
LITAFQ99732 EEF1DP4-201ENST00000446006 880 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 KRT16P4-201ENST00000453883 522 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 IGHV3-65-201ENST00000523210 341 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 AP000867.3-201ENST00000524675 377 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 MTDHP3-201ENST00000594186 672 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC10.32□□□□□ -0.76
LITAFQ99732 AC138894.3-201ENST00000603787 634 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 AC025062.2-201ENST00000605477 670 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.32□□□□□ -0.76
LITAFQ99732 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LITAFQ99732 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LITAFQ99732 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
LITAFQ99732 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 AC073621.1-201ENST00000392730 636 ntBASIC10.31□□□□□ -0.76
LITAFQ99732 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.31□□□□□ -0.76
LITAFQ99732 AC104076.2-201ENST00000448912 469 ntBASIC10.31□□□□□ -0.76
LITAFQ99732 PRYP6-201ENST00000514804 343 ntBASIC10.31□□□□□ -0.76
LITAFQ99732 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.31□□□□□ -0.76
LITAFQ99732 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.31□□□□□ -0.76
LITAFQ99732 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.31□□□□□ -0.76
LITAFQ99732 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LITAFQ99732 AC097376.2-205ENST00000610159 5334 ntBASIC10.31□□□□□ -0.76
LITAFQ99732 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 KRT8P37-201ENST00000451609 1420 ntBASIC10.31□□□□□ -0.76
LITAFQ99732 KRT8P22-201ENST00000562317 1415 ntBASIC10.31□□□□□ -0.76
LITAFQ99732 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LITAFQ99732 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.31□□□□□ -0.76
LITAFQ99732 AC005332.1-201ENST00000577698 1310 ntBASIC10.31□□□□□ -0.76
LITAFQ99732 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LITAFQ99732 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LITAFQ99732 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.3□□□□□ -0.76
LITAFQ99732 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 AL136982.4-201ENST00000437689 1740 ntBASIC10.3□□□□□ -0.76
LITAFQ99732 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
LITAFQ99732 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LITAFQ99732 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms