Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDNQ99608 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NDNQ99608 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NDNQ99608 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
NDNQ99608 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 KRT18P13-201ENST00000400056 1290 ntBASIC15.62■□□□□ 0.09
NDNQ99608 FO393414.2-201ENST00000405153 598 ntBASIC15.62■□□□□ 0.09
NDNQ99608 TARDBPP1-201ENST00000442013 1203 ntBASIC15.62■□□□□ 0.09
NDNQ99608 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.62■□□□□ 0.09
NDNQ99608 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.62■□□□□ 0.09
NDNQ99608 AC109322.1-201ENST00000524499 1264 ntBASIC15.62■□□□□ 0.09
NDNQ99608 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.62■□□□□ 0.09
NDNQ99608 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 AC023024.2-201ENST00000623561 1993 ntBASIC15.62■□□□□ 0.09
NDNQ99608 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.62■□□□□ 0.09
NDNQ99608 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 AC148477.4-201ENST00000613430 1793 ntBASIC15.62■□□□□ 0.09
NDNQ99608 CICP20-201ENST00000443330 2801 ntBASIC15.62■□□□□ 0.09
NDNQ99608 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NDNQ99608 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NDNQ99608 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NDNQ99608 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NDNQ99608 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.61■□□□□ 0.09
NDNQ99608 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.61■□□□□ 0.09
NDNQ99608 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NDNQ99608 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 AL080243.2-201ENST00000418783 582 ntBASIC15.61■□□□□ 0.09
NDNQ99608 AL645939.2-201ENST00000427340 991 ntBASIC15.61■□□□□ 0.09
NDNQ99608 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.61■□□□□ 0.09
NDNQ99608 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.61■□□□□ 0.09
NDNQ99608 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.61■□□□□ 0.09
NDNQ99608 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
NDNQ99608 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.61■□□□□ 0.09
NDNQ99608 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.61■□□□□ 0.09
NDNQ99608 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NDNQ99608 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NDNQ99608 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.61■□□□□ 0.09
NDNQ99608 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NDNQ99608 AL365209.1-201ENST00000624418 6473 ntBASIC15.61■□□□□ 0.09
NDNQ99608 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.6■□□□□ 0.09
NDNQ99608 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.6■□□□□ 0.09
NDNQ99608 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDNQ99608 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms