Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.65■□□□□ 0.58
EYA3Q99504 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EYA3Q99504 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EYA3Q99504 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.65■□□□□ 0.58
EYA3Q99504 AL008707.1-201ENST00000422498 534 ntBASIC18.65■□□□□ 0.58
EYA3Q99504 NKAIN1P1-201ENST00000435754 582 ntBASIC18.65■□□□□ 0.58
EYA3Q99504 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.65■□□□□ 0.58
EYA3Q99504 AC044849.1-201ENST00000519737 1188 ntBASIC18.65■□□□□ 0.58
EYA3Q99504 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.65■□□□□ 0.58
EYA3Q99504 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.65■□□□□ 0.58
EYA3Q99504 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.65■□□□□ 0.58
EYA3Q99504 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.65■□□□□ 0.58
EYA3Q99504 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EYA3Q99504 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EYA3Q99504 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EYA3Q99504 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EYA3Q99504 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EYA3Q99504 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EYA3Q99504 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EYA3Q99504 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
EYA3Q99504 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.65■□□□□ 0.58
EYA3Q99504 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EYA3Q99504 KRT8P4-201ENST00000509735 1454 ntBASIC18.65■□□□□ 0.58
EYA3Q99504 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.64■□□□□ 0.58
EYA3Q99504 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.64■□□□□ 0.58
EYA3Q99504 PCDHB19P-201ENST00000570871 2371 ntBASIC18.64■□□□□ 0.58
EYA3Q99504 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EYA3Q99504 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
EYA3Q99504 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
EYA3Q99504 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.64■□□□□ 0.58
EYA3Q99504 CYP2T1P-202ENST00000641596 2535 ntBASIC18.64■□□□□ 0.57
EYA3Q99504 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
EYA3Q99504 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.64■□□□□ 0.57
EYA3Q99504 RN7SL769P-201ENST00000469386 295 ntBASIC18.64■□□□□ 0.57
EYA3Q99504 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 AC106820.3-201ENST00000561653 397 ntBASIC18.64■□□□□ 0.57
EYA3Q99504 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.64■□□□□ 0.57
EYA3Q99504 AP001002.3-201ENST00000623482 206 ntBASIC18.64■□□□□ 0.57
EYA3Q99504 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.64■□□□□ 0.57
EYA3Q99504 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EYA3Q99504 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EYA3Q99504 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.63■□□□□ 0.57
EYA3Q99504 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
EYA3Q99504 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
EYA3Q99504 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.63■□□□□ 0.57
EYA3Q99504 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.63■□□□□ 0.57
EYA3Q99504 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.63■□□□□ 0.57
EYA3Q99504 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 CYP46A4P-201ENST00000414953 267 ntBASIC18.63■□□□□ 0.57
EYA3Q99504 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.63■□□□□ 0.57
EYA3Q99504 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.63■□□□□ 0.57
EYA3Q99504 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.63■□□□□ 0.57
EYA3Q99504 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.63■□□□□ 0.57
EYA3Q99504 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.63■□□□□ 0.57
EYA3Q99504 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EYA3Q99504 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.63■□□□□ 0.57
EYA3Q99504 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.63■□□□□ 0.57
EYA3Q99504 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.63■□□□□ 0.57
EYA3Q99504 CU633904.3-201ENST00000624042 1029 ntBASIC18.63■□□□□ 0.57
EYA3Q99504 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EYA3Q99504 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms