Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNGAP1Q96PV0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNGAP1Q96PV0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 AP001258.2-201ENST00000529891 490 ntBASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 AC132872.4-202ENST00000622924 2756 ntBASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNGAP1Q96PV0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 BTBD6P1-201ENST00000412176 1267 ntBASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 AC114812.1-204ENST00000449669 728 ntBASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 AL591846.1-201ENST00000451736 433 ntBASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms