Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.65■□□□□ 0.26
SNX27Q96L92 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.65■□□□□ 0.26
SNX27Q96L92 FTH1P14-201ENST00000482930 551 ntBASIC16.65■□□□□ 0.26
SNX27Q96L92 KRT18P25-201ENST00000508931 1278 ntBASIC16.65■□□□□ 0.26
SNX27Q96L92 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 SAMD11P1-201ENST00000571429 661 ntBASIC16.65■□□□□ 0.26
SNX27Q96L92 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.65■□□□□ 0.26
SNX27Q96L92 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 PRSS30P-206ENST00000641773 873 ntBASIC16.65■□□□□ 0.26
SNX27Q96L92 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNX27Q96L92 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNX27Q96L92 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
SNX27Q96L92 KRT8P35-201ENST00000483942 1338 ntBASIC16.65■□□□□ 0.26
SNX27Q96L92 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX27Q96L92 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX27Q96L92 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX27Q96L92 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX27Q96L92 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX27Q96L92 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX27Q96L92 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX27Q96L92 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 AC104457.1-201ENST00000401024 814 ntBASIC16.64■□□□□ 0.25
SNX27Q96L92 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 KLF2P2-201ENST00000416807 1039 ntBASIC16.64■□□□□ 0.25
SNX27Q96L92 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.64■□□□□ 0.25
SNX27Q96L92 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.64■□□□□ 0.25
SNX27Q96L92 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.64■□□□□ 0.25
SNX27Q96L92 AC104989.1-201ENST00000519711 778 ntBASIC16.64■□□□□ 0.25
SNX27Q96L92 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 MIR7845-201ENST00000618396 99 ntBASIC16.64■□□□□ 0.25
SNX27Q96L92 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX27Q96L92 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX27Q96L92 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX27Q96L92 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.63■□□□□ 0.25
SNX27Q96L92 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.63■□□□□ 0.25
SNX27Q96L92 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX27Q96L92 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX27Q96L92 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX27Q96L92 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX27Q96L92 NUS1P3-201ENST00000423502 862 ntBASIC16.63■□□□□ 0.25
SNX27Q96L92 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SNX27Q96L92 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX27Q96L92 CTBP2P5-201ENST00000454986 1264 ntBASIC16.63■□□□□ 0.25
SNX27Q96L92 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 MIR5572-201ENST00000583188 137 ntBASIC16.63■□□□□ 0.25
SNX27Q96L92 AC244669.2-201ENST00000612320 853 ntBASIC16.63■□□□□ 0.25
SNX27Q96L92 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms