Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 KRT8P44-201ENST00000441609 1350 ntBASIC13.57□□□□□ -0.24
CPNE2Q96FN4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 LINC01101-201ENST00000622953 1884 ntBASIC13.57□□□□□ -0.24
CPNE2Q96FN4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE2Q96FN4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 AC112693.3-201ENST00000624819 1983 ntBASIC13.56□□□□□ -0.24
CPNE2Q96FN4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 AC026396.1-201ENST00000419388 421 ntBASIC13.56□□□□□ -0.24
CPNE2Q96FN4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 AC092865.6-201ENST00000642101 219 ntBASIC13.56□□□□□ -0.24
CPNE2Q96FN4 CICP24-201ENST00000605464 2705 ntBASIC13.56□□□□□ -0.24
CPNE2Q96FN4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 AC005089.1-201ENST00000619486 2241 ntBASIC13.56□□□□□ -0.24
CPNE2Q96FN4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 AL136982.4-201ENST00000437689 1740 ntBASIC13.56□□□□□ -0.24
CPNE2Q96FN4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE2Q96FN4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 UXT-AS1-201ENST00000590504 1525 ntBASIC13.55□□□□□ -0.24
CPNE2Q96FN4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 MROH4P-201ENST00000431302 1578 ntBASIC13.55□□□□□ -0.24
CPNE2Q96FN4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 YBX2P1-201ENST00000394192 760 ntBASIC13.55□□□□□ -0.24
CPNE2Q96FN4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE2Q96FN4 SPCS2P4-201ENST00000436160 681 ntBASIC13.55□□□□□ -0.24
CPNE2Q96FN4 MKNK2P1-201ENST00000437526 628 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms