Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 AC134312.5-201ENST00000568031 1313 ntBASIC15.43■□□□□ 0.06
ECHDC3Q96DC8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 RNU1-114P-201ENST00000365297 166 ntBASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 AL139094.1-201ENST00000405549 1188 ntBASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ECHDC3Q96DC8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 REXO1L4P-201ENST00000605109 1937 ntBASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 AC018665.1-201ENST00000622927 1362 ntBASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 AC092933.1-201ENST00000393644 945 ntBASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 ACTBP8-201ENST00000403258 1108 ntBASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 KLF2P2-201ENST00000416807 1039 ntBASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.41■□□□□ 0.06
ECHDC3Q96DC8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms