Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 AC245100.5-201ENST00000452108 331 ntBASIC13.82□□□□□ -0.2
RFT1Q96AA3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 AC145285.3-201ENST00000564603 959 ntBASIC13.82□□□□□ -0.2
RFT1Q96AA3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 AL122018.1-201ENST00000446607 2310 ntBASIC13.82□□□□□ -0.2
RFT1Q96AA3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 LINC01230-201ENST00000625222 3017 ntBASIC13.82□□□□□ -0.2
RFT1Q96AA3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AC074386.1-202ENST00000463561 864 ntBASIC13.81□□□□□ -0.2
RFT1Q96AA3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AL138918.1-201ENST00000568306 659 ntBASIC13.81□□□□□ -0.2
RFT1Q96AA3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 AL161645.1-201ENST00000622716 1255 ntBASIC13.81□□□□□ -0.2
RFT1Q96AA3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 IL9RP2-201ENST00000423948 1312 ntBASIC13.81□□□□□ -0.2
RFT1Q96AA3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFT1Q96AA3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
RFT1Q96AA3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms