Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.14■□□□□ 0.01
NCLNQ969V3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 AC090616.6-203ENST00000579186 1945 ntBASIC15.14■□□□□ 0.01
NCLNQ969V3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.14■□□□□ 0.01
NCLNQ969V3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 AC107890.1-201ENST00000422478 521 ntBASIC15.14■□□□□ 0.01
NCLNQ969V3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 DUX4L27-201ENST00000554796 1261 ntBASIC15.14■□□□□ 0.01
NCLNQ969V3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.14■□□□□ 0.01
NCLNQ969V3 AC007967.4-201ENST00000614700 386 ntBASIC15.14■□□□□ 0.01
NCLNQ969V3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.14■□□□□ 0.01
NCLNQ969V3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.14■□□□□ 0.01
NCLNQ969V3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.14■□□□□ 0.01
NCLNQ969V3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NCLNQ969V3 AP001282.1-201ENST00000531301 1499 ntBASIC15.14■□□□□ 0.01
NCLNQ969V3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.13■□□□□ 0.01
NCLNQ969V3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NCLNQ969V3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NCLNQ969V3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.13■□□□□ 0.01
NCLNQ969V3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 AC061975.2-201ENST00000581722 295 ntBASIC15.13■□□□□ 0.01
NCLNQ969V3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 AC105250.1-201ENST00000509378 2057 ntBASIC15.13■□□□□ 0.01
NCLNQ969V3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.13■□□□□ 0.01
NCLNQ969V3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCLNQ969V3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NCLNQ969V3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.13■□□□□ 0.01
NCLNQ969V3 AC134407.2-201ENST00000625089 1978 ntBASIC15.13■□□□□ 0.01
NCLNQ969V3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.13■□□□□ 0.01
NCLNQ969V3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
NCLNQ969V3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.12■□□□□ 0.01
NCLNQ969V3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCLNQ969V3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms