Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SNX21Q969T3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX21Q969T3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX21Q969T3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX21Q969T3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNX21Q969T3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SNX21Q969T3 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.34■□□□□ 0.53
SNX21Q969T3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX21Q969T3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNX21Q969T3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNX21Q969T3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX21Q969T3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX21Q969T3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX21Q969T3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNX21Q969T3 TPT1P11-201ENST00000458482 498 ntBASIC18.34■□□□□ 0.53
SNX21Q969T3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX21Q969T3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX21Q969T3 AC140113.2-201ENST00000604370 208 ntBASIC18.34■□□□□ 0.53
SNX21Q969T3 FAM197Y3-203ENST00000618346 717 ntBASIC18.34■□□□□ 0.53
SNX21Q969T3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SNX21Q969T3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX21Q969T3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 Z97205.2-201ENST00000564697 1639 ntBASIC18.34■□□□□ 0.53
SNX21Q969T3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNX21Q969T3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SNX21Q969T3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX21Q969T3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNX21Q969T3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX21Q969T3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX21Q969T3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX21Q969T3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX21Q969T3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX21Q969T3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX21Q969T3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
SNX21Q969T3 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.53
SNX21Q969T3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX21Q969T3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX21Q969T3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SNX21Q969T3 KRT18P64-201ENST00000434946 1219 ntBASIC18.33■□□□□ 0.52
SNX21Q969T3 AL592309.1-201ENST00000443127 649 ntBASIC18.33■□□□□ 0.52
SNX21Q969T3 TIMM8BP1-201ENST00000452384 211 ntBASIC18.33■□□□□ 0.52
SNX21Q969T3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX21Q969T3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.33■□□□□ 0.52
SNX21Q969T3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX21Q969T3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SNX21Q969T3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.33■□□□□ 0.52
SNX21Q969T3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX21Q969T3 AC027601.4-201ENST00000611259 610 ntBASIC18.33■□□□□ 0.52
SNX21Q969T3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX21Q969T3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SNX21Q969T3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX21Q969T3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX21Q969T3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SNX21Q969T3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX21Q969T3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX21Q969T3 ZNF259P1-201ENST00000407656 1365 ntBASIC18.32■□□□□ 0.52
SNX21Q969T3 LILRP1-201ENST00000444199 1370 ntBASIC18.32■□□□□ 0.52
SNX21Q969T3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SNX21Q969T3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX21Q969T3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms