Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 NUDT4P2-201ENST00000578341 546 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 MIR4313-201ENST00000580760 101 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.26□□□□□ -0.29
USP9XQ93008 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.26□□□□□ -0.29
USP9XQ93008 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.26□□□□□ -0.29
USP9XQ93008 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.26□□□□□ -0.29
USP9XQ93008 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.26□□□□□ -0.29
USP9XQ93008 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.26□□□□□ -0.29
USP9XQ93008 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.26□□□□□ -0.29
USP9XQ93008 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
USP9XQ93008 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.26□□□□□ -0.29
USP9XQ93008 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 CLUHP2-201ENST00000426660 1303 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 CHCHD2P9-201ENST00000461726 456 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 RN7SL258P-201ENST00000478664 300 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 MRPL22P1-201ENST00000505398 616 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.26□□□□□ -0.29
USP9XQ93008 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.26□□□□□ -0.29
USP9XQ93008 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USP9XQ93008 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.26□□□□□ -0.29
USP9XQ93008 AC107464.3-201ENST00000609172 737 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 LINC00431-202ENST00000636375 159 ntBASIC13.26□□□□□ -0.29
USP9XQ93008 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.25□□□□□ -0.29
USP9XQ93008 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
USP9XQ93008 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
USP9XQ93008 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 AQP7P5-201ENST00000428759 1049 ntBASIC13.25□□□□□ -0.29
USP9XQ93008 AQP7P4-201ENST00000447083 1042 ntBASIC13.25□□□□□ -0.29
USP9XQ93008 AQP7P2-201ENST00000453967 1041 ntBASIC13.25□□□□□ -0.29
USP9XQ93008 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.25□□□□□ -0.29
USP9XQ93008 MIR6125-201ENST00000618986 96 ntBASIC13.25□□□□□ -0.29
USP9XQ93008 AQP7P3-201ENST00000624547 1041 ntBASIC13.25□□□□□ -0.29
USP9XQ93008 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.25□□□□□ -0.29
USP9XQ93008 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.25□□□□□ -0.29
USP9XQ93008 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.25□□□□□ -0.29
USP9XQ93008 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.25□□□□□ -0.29
USP9XQ93008 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.25□□□□□ -0.29
USP9XQ93008 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.25□□□□□ -0.29
USP9XQ93008 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
USP9XQ93008 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.25□□□□□ -0.29
USP9XQ93008 AL645728.2-202ENST00000641679 227 ntBASIC13.25□□□□□ -0.29
USP9XQ93008 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.25□□□□□ -0.29
USP9XQ93008 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USP9XQ93008 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
USP9XQ93008 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.24□□□□□ -0.29
USP9XQ93008 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USP9XQ93008 AC010141.1-201ENST00000411585 623 ntBASIC13.24□□□□□ -0.29
USP9XQ93008 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.24□□□□□ -0.29
USP9XQ93008 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
USP9XQ93008 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms