Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHC3Q92529 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.49■□□□□ 0.23
SHC3Q92529 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 CICP23-201ENST00000605013 2741 ntBASIC16.49■□□□□ 0.23
SHC3Q92529 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.49■□□□□ 0.23
SHC3Q92529 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.49■□□□□ 0.23
SHC3Q92529 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.49■□□□□ 0.23
SHC3Q92529 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.49■□□□□ 0.23
SHC3Q92529 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.49■□□□□ 0.23
SHC3Q92529 RRP7BP-205ENST00000566851 833 ntBASIC16.49■□□□□ 0.23
SHC3Q92529 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.49■□□□□ 0.23
SHC3Q92529 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.49■□□□□ 0.23
SHC3Q92529 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.49■□□□□ 0.23
SHC3Q92529 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 AL359258.3-201ENST00000622910 2331 ntBASIC16.49■□□□□ 0.23
SHC3Q92529 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.49■□□□□ 0.23
SHC3Q92529 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SHC3Q92529 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SHC3Q92529 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHC3Q92529 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.48■□□□□ 0.23
SHC3Q92529 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SHC3Q92529 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 MEP1AP4-201ENST00000423244 1087 ntBASIC16.48■□□□□ 0.23
SHC3Q92529 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 GNAQP1-201ENST00000444815 1067 ntBASIC16.48■□□□□ 0.23
SHC3Q92529 SPTLC1P1-201ENST00000447199 261 ntBASIC16.48■□□□□ 0.23
SHC3Q92529 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 INGX-202ENST00000489074 768 ntBASIC16.48■□□□□ 0.23
SHC3Q92529 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.48■□□□□ 0.23
SHC3Q92529 AC026410.3-201ENST00000514280 936 ntBASIC16.48■□□□□ 0.23
SHC3Q92529 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.48■□□□□ 0.23
SHC3Q92529 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.48■□□□□ 0.23
SHC3Q92529 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 FGD5P1-202ENST00000614866 2498 ntBASIC16.48■□□□□ 0.23
SHC3Q92529 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.48■□□□□ 0.23
SHC3Q92529 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.48■□□□□ 0.23
SHC3Q92529 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHC3Q92529 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SHC3Q92529 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHC3Q92529 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHC3Q92529 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SHC3Q92529 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHC3Q92529 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms