Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 OR2I1P-209ENST00000641730 5365 ntBASIC14□□□□□ -0.17
FNDC9Q8TBE3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AL121723.1-201ENST00000445194 1519 ntBASIC14□□□□□ -0.17
FNDC9Q8TBE3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 KRT17P7-201ENST00000451704 1104 ntBASIC14□□□□□ -0.17
FNDC9Q8TBE3 KRT18P43-201ENST00000469825 1281 ntBASIC14□□□□□ -0.17
FNDC9Q8TBE3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AC092552.1-201ENST00000547243 906 ntBASIC14□□□□□ -0.17
FNDC9Q8TBE3 CR383656.12-201ENST00000549567 513 ntBASIC14□□□□□ -0.17
FNDC9Q8TBE3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 AC097376.2-205ENST00000610159 5334 ntBASIC14□□□□□ -0.17
FNDC9Q8TBE3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14□□□□□ -0.17
FNDC9Q8TBE3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FNDC9Q8TBE3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AC144831.1-201ENST00000573312 2656 ntBASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 INE1-201ENST00000456273 945 ntBASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AC011495.1-201ENST00000498085 584 ntBASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 WFDC1-204ENST00000613603 549 ntBASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms