Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRFBP1Q8NEF9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRFBP1Q8NEF9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRFBP1Q8NEF9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.83□□□□□ -0.03
SRFBP1Q8NEF9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 MRPS18AP1-201ENST00000414458 589 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RARRES2P5-201ENST00000564013 466 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RRP7BP-205ENST00000566851 833 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 AC036164.1-201ENST00000570544 333 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 PPT1-215ENST00000641471 2368 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 TCAF2P1-201ENST00000291129 2421 ntBASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SRFBP1Q8NEF9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AC093004.1-201ENST00000508850 424 ntBASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 TPRX2P-201ENST00000535362 881 ntBASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AC104794.3-201ENST00000566840 1248 ntBASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.82□□□□□ -0.04
SRFBP1Q8NEF9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms