Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 AC092384.3-202ENST00000564646 2873 ntBASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf42Q8N5U0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 R3HDM2P2-201ENST00000401880 2116 ntBASIC13□□□□□ -0.33
C11orf42Q8N5U0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 AC004461.2-201ENST00000629517 803 ntBASIC13□□□□□ -0.33
C11orf42Q8N5U0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
C11orf42Q8N5U0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C11orf42Q8N5U0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 AP003680.1-201ENST00000598970 3660 ntBASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 MIR661-201ENST00000384842 89 ntBASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 RPL13P2-201ENST00000440687 659 ntBASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 AC074044.1-201ENST00000609673 707 ntBASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf42Q8N5U0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms