Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SIX5Q8N196 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SIX5Q8N196 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.9■□□□□ 0.14
SIX5Q8N196 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 AC104457.1-201ENST00000401024 814 ntBASIC15.9■□□□□ 0.14
SIX5Q8N196 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX5Q8N196 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX5Q8N196 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX5Q8N196 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX5Q8N196 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX5Q8N196 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX5Q8N196 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX5Q8N196 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX5Q8N196 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.9■□□□□ 0.14
SIX5Q8N196 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SIX5Q8N196 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX5Q8N196 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SIX5Q8N196 AP001282.1-201ENST00000531301 1499 ntBASIC15.9■□□□□ 0.14
SIX5Q8N196 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX5Q8N196 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SIX5Q8N196 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SIX5Q8N196 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
SIX5Q8N196 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SIX5Q8N196 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.89■□□□□ 0.13
SIX5Q8N196 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SIX5Q8N196 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 MIR33B-201ENST00000385104 96 ntBASIC15.89■□□□□ 0.13
SIX5Q8N196 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.89■□□□□ 0.13
SIX5Q8N196 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.89■□□□□ 0.13
SIX5Q8N196 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SIX5Q8N196 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 HSPB1P2-201ENST00000448722 546 ntBASIC15.89■□□□□ 0.13
SIX5Q8N196 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.89■□□□□ 0.13
SIX5Q8N196 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.89■□□□□ 0.13
SIX5Q8N196 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.89■□□□□ 0.13
SIX5Q8N196 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.89■□□□□ 0.13
SIX5Q8N196 AC138649.2-201ENST00000615886 705 ntBASIC15.89■□□□□ 0.13
SIX5Q8N196 AP001505.2-201ENST00000616815 443 ntBASIC15.89■□□□□ 0.13
SIX5Q8N196 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SIX5Q8N196 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX5Q8N196 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms