Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.9■□□□□ 0.94
XRN1Q8IZH2 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC20.9■□□□□ 0.94
XRN1Q8IZH2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.9■□□□□ 0.94
XRN1Q8IZH2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.9■□□□□ 0.94
XRN1Q8IZH2 AC133540.1-201ENST00000620845 1019 ntBASIC20.9■□□□□ 0.94
XRN1Q8IZH2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
XRN1Q8IZH2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XRN1Q8IZH2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
XRN1Q8IZH2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.89■□□□□ 0.94
XRN1Q8IZH2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
XRN1Q8IZH2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
XRN1Q8IZH2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.89■□□□□ 0.94
XRN1Q8IZH2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
XRN1Q8IZH2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 ORAOV1P1-201ENST00000503108 395 ntBASIC20.89■□□□□ 0.93
XRN1Q8IZH2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
XRN1Q8IZH2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 AL583805.1-201ENST00000391389 531 ntBASIC20.88■□□□□ 0.93
XRN1Q8IZH2 OR2R1P-201ENST00000441404 914 ntBASIC20.88■□□□□ 0.93
XRN1Q8IZH2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 AC026410.1-201ENST00000507366 1101 ntBASIC20.88■□□□□ 0.93
XRN1Q8IZH2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 AC105137.3-201ENST00000617588 984 ntBASIC20.88■□□□□ 0.93
XRN1Q8IZH2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 AC009084.3-201ENST00000623356 437 ntBASIC20.88■□□□□ 0.93
XRN1Q8IZH2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.88■□□□□ 0.93
XRN1Q8IZH2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 AC006449.5-201ENST00000610658 2098 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 PIN4P1-201ENST00000451079 396 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 CICP12-201ENST00000455801 843 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 AC015909.3-201ENST00000572855 1794 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 AC234644.1-201ENST00000406065 370 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC20.87■□□□□ 0.93
XRN1Q8IZH2 RPL7P35-201ENST00000446943 740 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 MRPL22P1-201ENST00000505398 616 ntBASIC20.87■□□□□ 0.93
XRN1Q8IZH2 GCOM2-201ENST00000509133 1104 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms