Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 MIR663B-201ENST00000408361 115 ntBASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 UPF3AP2-201ENST00000457924 1132 ntBASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 RN7SL48P-201ENST00000579283 293 ntBASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 LRRC59-203ENST00000576448 1531 ntBASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 AC105129.2-201ENST00000559536 390 ntBASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEFF1Q8IYR6 AL023775.1-201ENST00000454907 1746 ntBASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 POM121L10P-201ENST00000436994 1285 ntBASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.31■□□□□ 0.04
TMEFF1Q8IYR6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms