Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 KRT18P36-201ENST00000411618 1276 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 AC097065.1-201ENST00000425737 517 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 SCARNA21-201ENST00000517026 139 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 AP002803.1-201ENST00000528836 498 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 TMCO5B-205ENST00000530020 894 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 DNM1P30-201ENST00000563586 452 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.41■□□□□ 0.54
SLX4Q8IY92 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 PIN4P1-201ENST00000451079 396 ntBASIC18.41■□□□□ 0.54
SLX4Q8IY92 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 AL359258.3-201ENST00000622910 2331 ntBASIC18.41■□□□□ 0.54
SLX4Q8IY92 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLX4Q8IY92 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLX4Q8IY92 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 AL157407.1-201ENST00000435784 904 ntBASIC18.4■□□□□ 0.54
SLX4Q8IY92 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 PRORSD1P-202ENST00000563365 2154 ntBASIC18.4■□□□□ 0.54
SLX4Q8IY92 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLX4Q8IY92 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.4■□□□□ 0.54
SLX4Q8IY92 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLX4Q8IY92 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLX4Q8IY92 AL512430.1-201ENST00000392575 860 ntBASIC18.39■□□□□ 0.54
SLX4Q8IY92 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLX4Q8IY92 RN7SL258P-201ENST00000478664 300 ntBASIC18.39■□□□□ 0.54
SLX4Q8IY92 RN7SL818P-201ENST00000485099 259 ntBASIC18.39■□□□□ 0.54
SLX4Q8IY92 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.39■□□□□ 0.54
SLX4Q8IY92 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.39■□□□□ 0.54
SLX4Q8IY92 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SLX4Q8IY92 RN7SL725P-201ENST00000606439 259 ntBASIC18.39■□□□□ 0.54
SLX4Q8IY92 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.39■□□□□ 0.54
SLX4Q8IY92 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SLX4Q8IY92 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLX4Q8IY92 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLX4Q8IY92 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.39■□□□□ 0.54
SLX4Q8IY92 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLX4Q8IY92 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms