Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AC023141.5-201ENST00000458585 616 ntBASIC13.88□□□□□ -0.19
LRRC28Q86X40 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 HLA-J-203ENST00000494367 1087 ntBASIC13.88□□□□□ -0.19
LRRC28Q86X40 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AC093520.2-201ENST00000561830 333 ntBASIC13.88□□□□□ -0.19
LRRC28Q86X40 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 AC023024.2-201ENST00000623561 1993 ntBASIC13.88□□□□□ -0.19
LRRC28Q86X40 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
LRRC28Q86X40 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.88□□□□□ -0.19
LRRC28Q86X40 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRC28Q86X40 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 TSEN15P1-201ENST00000423257 515 ntBASIC13.87□□□□□ -0.19
LRRC28Q86X40 METTL21AP1-201ENST00000438852 635 ntBASIC13.87□□□□□ -0.19
LRRC28Q86X40 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 AC084121.4-201ENST00000641598 221 ntBASIC13.87□□□□□ -0.19
LRRC28Q86X40 AF228730.8-201ENST00000642140 221 ntBASIC13.87□□□□□ -0.19
LRRC28Q86X40 AC006504.5-208ENST00000588784 2401 ntBASIC13.87□□□□□ -0.19
LRRC28Q86X40 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRC28Q86X40 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRC28Q86X40 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.86□□□□□ -0.19
LRRC28Q86X40 BEND3P1-201ENST00000421591 1944 ntBASIC13.86□□□□□ -0.19
LRRC28Q86X40 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRC28Q86X40 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 402.7 ms