Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC026803.1-201ENST00000569130 274 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 OR10B1P-201ENST00000601666 907 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 LINC00554-201ENST00000564841 3011 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PIN4P1-201ENST00000451079 396 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 NAP1L6-202ENST00000641404 1222 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.53□□□□□ -0.72
CSMD3Q7Z407 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AC130709.1-201ENST00000484779 1212 ntBASIC10.53□□□□□ -0.72
CSMD3Q7Z407 NSD1-211ENST00000511258 809 ntTSL 3 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 PCDHA14-201ENST00000506751 2298 ntBASIC10.53□□□□□ -0.72
CSMD3Q7Z407 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AL157791.1-201ENST00000553667 1699 ntBASIC10.53□□□□□ -0.72
CSMD3Q7Z407 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AL008718.2-201ENST00000609206 1313 ntBASIC10.53□□□□□ -0.72
CSMD3Q7Z407 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.53□□□□□ -0.72
CSMD3Q7Z407 FRMD6-AS1-201ENST00000617151 2229 ntBASIC10.52□□□□□ -0.72
CSMD3Q7Z407 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CSMD3Q7Z407 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CSMD3Q7Z407 AC092127.1-201ENST00000567093 3455 ntBASIC10.52□□□□□ -0.72
CSMD3Q7Z407 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms